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Diffstat (limited to 'third_party/googleapis/google/genomics/v1/readgroupset.proto')
-rw-r--r-- | third_party/googleapis/google/genomics/v1/readgroupset.proto | 64 |
1 files changed, 64 insertions, 0 deletions
diff --git a/third_party/googleapis/google/genomics/v1/readgroupset.proto b/third_party/googleapis/google/genomics/v1/readgroupset.proto new file mode 100644 index 0000000000..8d5131e1a9 --- /dev/null +++ b/third_party/googleapis/google/genomics/v1/readgroupset.proto @@ -0,0 +1,64 @@ +// Copyright 2016 Google Inc. +// +// Licensed under the Apache License, Version 2.0 (the "License"); +// you may not use this file except in compliance with the License. +// You may obtain a copy of the License at +// +// http://www.apache.org/licenses/LICENSE-2.0 +// +// Unless required by applicable law or agreed to in writing, software +// distributed under the License is distributed on an "AS IS" BASIS, +// WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. +// See the License for the specific language governing permissions and +// limitations under the License. + +syntax = "proto3"; + +package google.genomics.v1; + +import "google/api/annotations.proto"; +import "google/genomics/v1/readgroup.proto"; +import "google/protobuf/struct.proto"; + +option cc_enable_arenas = true; +option go_package = "google.golang.org/genproto/googleapis/genomics/v1;genomics"; +option java_multiple_files = true; +option java_outer_classname = "ReadGroupSetProto"; +option java_package = "com.google.genomics.v1"; + + +// A read group set is a logical collection of read groups, which are +// collections of reads produced by a sequencer. A read group set typically +// models reads corresponding to one sample, sequenced one way, and aligned one +// way. +// +// * A read group set belongs to one dataset. +// * A read group belongs to one read group set. +// * A read belongs to one read group. +// +// For more genomics resource definitions, see [Fundamentals of Google +// Genomics](https://cloud.google.com/genomics/fundamentals-of-google-genomics) +message ReadGroupSet { + // The server-generated read group set ID, unique for all read group sets. + string id = 1; + + // The dataset to which this read group set belongs. + string dataset_id = 2; + + // The reference set to which the reads in this read group set are aligned. + string reference_set_id = 3; + + // The read group set name. By default this will be initialized to the sample + // name of the sequenced data contained in this set. + string name = 4; + + // The filename of the original source file for this read group set, if any. + string filename = 5; + + // The read groups in this set. There are typically 1-10 read groups in a read + // group set. + repeated ReadGroup read_groups = 6; + + // A map of additional read group set information. + map<string, google.protobuf.ListValue> info = 7; +} |