1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
|
# Copyright 2016 The TensorFlow Authors. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
# ==============================================================================
"""A tf.learn implementation of tensor_forest (extremely random forests)."""
from __future__ import absolute_import
from __future__ import division
from __future__ import print_function
import time
import numpy as np
import six
from tensorflow.contrib import framework as contrib_framework
from tensorflow.contrib.learn.python.learn import monitors as mon
from tensorflow.contrib.learn.python.learn.estimators import estimator
from tensorflow.contrib.learn.python.learn.estimators import run_config
from tensorflow.contrib.tensor_forest.client import eval_metrics
from tensorflow.contrib.tensor_forest.data import data_ops
from tensorflow.contrib.tensor_forest.python import tensor_forest
from tensorflow.python.ops import array_ops
from tensorflow.python.ops import control_flow_ops
from tensorflow.python.ops import math_ops
from tensorflow.python.ops import state_ops
class LossMonitor(mon.EveryN):
"""Terminates training when training loss stops decreasing."""
def __init__(self,
early_stopping_rounds,
every_n_steps):
super(LossMonitor, self).__init__(every_n_steps=every_n_steps)
self.early_stopping_rounds = early_stopping_rounds
self.min_loss = None
self.min_loss_step = 0
def set_estimator(self, est):
"""This function gets called in the same graph as _get_train_ops."""
super(LossMonitor, self).set_estimator(est)
self._loss_op_name = est.training_loss.name
def every_n_step_end(self, step, outputs):
super(LossMonitor, self).every_n_step_end(step, outputs)
current_loss = outputs[self._loss_op_name]
if self.min_loss is None or current_loss < self.min_loss:
self.min_loss = current_loss
self.min_loss_step = step
return step - self.min_loss_step >= self.early_stopping_rounds
class TensorForestEstimator(estimator.BaseEstimator):
"""An estimator that can train and evaluate a random forest."""
def __init__(self, params, device_assigner=None, model_dir=None,
graph_builder_class=tensor_forest.RandomForestGraphs,
master='', accuracy_metric=None,
tf_random_seed=None, config=None):
self.params = params.fill()
self.accuracy_metric = (accuracy_metric or
('r2' if self.params.regression else 'accuracy'))
self.data_feeder = None
self.device_assigner = (
device_assigner or tensor_forest.RandomForestDeviceAssigner())
self.graph_builder_class = graph_builder_class
self.training_args = {}
self.construction_args = {}
super(TensorForestEstimator, self).__init__(model_dir=model_dir,
config=config)
def predict_proba(
self, x=None, input_fn=None, batch_size=None, as_iterable=False):
"""Returns prediction probabilities for given features (classification).
Args:
x: features.
input_fn: Input function. If set, x and y must be None.
batch_size: Override default batch size.
as_iterable: If True, return an iterable which keeps yielding predictions
for each example until inputs are exhausted. Note: The inputs must
terminate if you want the iterable to terminate (e.g. be sure to pass
num_epochs=1 if you are using something like read_batch_features).
Returns:
Numpy array of predicted probabilities (or an iterable of predicted
probabilities if as_iterable is True).
Raises:
ValueError: If both or neither of x and input_fn were given.
"""
return super(TensorForestEstimator, self).predict(
x=x, input_fn=input_fn, batch_size=batch_size, as_iterable=as_iterable)
def predict(
self, x=None, input_fn=None, axis=None, batch_size=None,
as_iterable=False):
"""Returns predictions for given features.
Args:
x: features.
input_fn: Input function. If set, x must be None.
axis: Axis on which to argmax (for classification).
Last axis is used by default.
batch_size: Override default batch size.
as_iterable: If True, return an iterable which keeps yielding predictions
for each example until inputs are exhausted. Note: The inputs must
terminate if you want the iterable to terminate (e.g. be sure to pass
num_epochs=1 if you are using something like read_batch_features).
Returns:
Numpy array of predicted classes or regression values (or an iterable of
predictions if as_iterable is True).
"""
probabilities = self.predict_proba(
x=x, input_fn=input_fn, batch_size=batch_size, as_iterable=as_iterable)
if self.params.regression:
return probabilities
else:
if as_iterable:
return (np.argmax(p, axis=0) for p in probabilities)
else:
return np.argmax(probabilities, axis=1)
def _get_train_ops(self, features, targets):
"""Method that builds model graph and returns trainer ops.
Args:
features: `Tensor` or `dict` of `Tensor` objects.
targets: `Tensor` or `dict` of `Tensor` objects.
Returns:
Tuple of train `Operation` and loss `Tensor`.
"""
features, spec = data_ops.ParseDataTensorOrDict(features)
labels = data_ops.ParseLabelTensorOrDict(targets)
graph_builder = self.graph_builder_class(
self.params, device_assigner=self.device_assigner,
**self.construction_args)
epoch = None
if self.data_feeder:
epoch = self.data_feeder.make_epoch_variable()
train = control_flow_ops.group(
graph_builder.training_graph(
features, labels, data_spec=spec, epoch=epoch,
**self.training_args),
state_ops.assign_add(contrib_framework.get_global_step(), 1))
self.training_loss = graph_builder.training_loss(features, targets)
return train, self.training_loss
def _get_predict_ops(self, features):
graph_builder = self.graph_builder_class(
self.params, device_assigner=self.device_assigner, training=False,
**self.construction_args)
features, spec = data_ops.ParseDataTensorOrDict(features)
return graph_builder.inference_graph(features, data_spec=spec)
def _get_eval_ops(self, features, targets, metrics):
features, spec = data_ops.ParseDataTensorOrDict(features)
labels = data_ops.ParseLabelTensorOrDict(targets)
graph_builder = self.graph_builder_class(
self.params, device_assigner=self.device_assigner, training=False,
**self.construction_args)
probabilities = graph_builder.inference_graph(features, data_spec=spec)
# One-hot the labels.
if not self.params.regression:
labels = math_ops.to_int64(array_ops.one_hot(math_ops.to_int64(
array_ops.squeeze(labels)), self.params.num_classes, 1, 0))
if metrics is None:
metrics = {self.accuracy_metric:
eval_metrics.get_metric(self.accuracy_metric)}
result = {}
for name, metric in six.iteritems(metrics):
result[name] = metric(probabilities, labels)
return result
|