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git's index broke and I was unable to restore it. While this is not git-annex' problem, it should still be possible to get my data in an un-annexed state.
% git status
fatal: index file smaller than expected
% git annex unannex foo
fatal: index file smaller than expected
% git annex uninit
fatal: index file smaller than expected
uninit
pre-commit hook (/path/to/git-annex/.git/hooks/pre-commit) contents modified; not deleting. Edit it to remove call to git annex.
ok
%
Ttbomk, the softlinks and objects are enough to un-annex the files; side-stepping git's index if necessary.
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