1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
|
{- git-annex assistant sanity checker
-
- Copyright 2012, 2013 Joey Hess <joey@kitenet.net>
-
- Licensed under the GNU GPL version 3 or higher.
-}
{-# LANGUAGE CPP #-}
module Assistant.Threads.SanityChecker (
sanityCheckerStartupThread,
sanityCheckerDailyThread,
sanityCheckerHourlyThread
) where
import Assistant.Common
import Assistant.DaemonStatus
import Assistant.Alert
import Assistant.Repair
import Assistant.Drop
import Assistant.Ssh
import Assistant.TransferQueue
import Assistant.Types.UrlRenderer
import Assistant.Restart
import qualified Annex.Branch
import qualified Git
import qualified Git.LsFiles
import qualified Git.Command.Batch
import qualified Git.Config
import Utility.ThreadScheduler
import qualified Assistant.Threads.Watcher as Watcher
import Utility.Batch
import Utility.NotificationBroadcaster
import Config
import Utility.HumanTime
import Utility.Tense
import Git.Repair
import Git.Index
import Assistant.Unused
import Logs.Unused
import Logs.Transfer
import Config.Files
import Utility.DiskFree
import qualified Annex
#ifdef WITH_WEBAPP
import Assistant.WebApp.Types
#endif
#ifndef mingw32_HOST_OS
import Utility.LogFile
#endif
import Types.Key (keyBackendName)
import Data.Time.Clock.POSIX
import qualified Data.Text as T
{- This thread runs once at startup, and most other threads wait for it
- to finish. (However, the webapp thread does not, to prevent the UI
- being nonresponsive.) -}
sanityCheckerStartupThread :: Maybe Duration -> NamedThread
sanityCheckerStartupThread startupdelay = namedThreadUnchecked "SanityCheckerStartup" $ do
{- Stale git locks can prevent commits from happening, etc. -}
void $ repairStaleGitLocks =<< liftAnnex gitRepo
{- A corrupt index file can prevent the assistant from working at
- all, so detect and repair. -}
ifM (not <$> liftAnnex (inRepo checkIndexFast))
( do
notice ["corrupt index file found at startup; removing and restaging"]
liftAnnex $ inRepo $ nukeFile . indexFile
{- Normally the startup scan avoids re-staging files,
- but with the index deleted, everything needs to be
- restaged. -}
modifyDaemonStatus_ $ \s -> s { forceRestage = True }
, whenM (liftAnnex $ inRepo missingIndex) $ do
debug ["no index file; restaging"]
modifyDaemonStatus_ $ \s -> s { forceRestage = True }
)
{- If the git-annex index file is corrupt, it's ok to remove it;
- the data from the git-annex branch will be used, and the index
- will be automatically regenerated. -}
unlessM (liftAnnex $ Annex.Branch.withIndex $ inRepo $ Git.Repair.checkIndexFast) $ do
notice ["corrupt annex/index file found at startup; removing"]
liftAnnex $ liftIO . nukeFile =<< fromRepo gitAnnexIndex
{- Fix up ssh remotes set up by past versions of the assistant. -}
liftIO $ fixUpSshRemotes
{- Clean up old temp files. -}
void $ liftAnnex $ tryNonAsync $ do
cleanOldTmpMisc
cleanReallyOldTmp
{- If there's a startup delay, it's done here. -}
liftIO $ maybe noop (threadDelaySeconds . Seconds . fromIntegral . durationSeconds) startupdelay
{- Notify other threads that the startup sanity check is done. -}
status <- getDaemonStatus
liftIO $ sendNotification $ startupSanityCheckNotifier status
{- This thread wakes up hourly for inxepensive frequent sanity checks. -}
sanityCheckerHourlyThread :: NamedThread
sanityCheckerHourlyThread = namedThread "SanityCheckerHourly" $ forever $ do
liftIO $ threadDelaySeconds $ Seconds oneHour
hourlyCheck
{- This thread wakes up daily to make sure the tree is in good shape. -}
sanityCheckerDailyThread :: UrlRenderer -> NamedThread
sanityCheckerDailyThread urlrenderer = namedThread "SanityCheckerDaily" $ forever $ do
waitForNextCheck
debug ["starting sanity check"]
void $ alertWhile sanityCheckAlert go
debug ["sanity check complete"]
where
go = do
modifyDaemonStatus_ $ \s -> s { sanityCheckRunning = True }
now <- liftIO getPOSIXTime -- before check started
r <- either showerr return
=<< (tryIO . batch) <~> dailyCheck urlrenderer
modifyDaemonStatus_ $ \s -> s
{ sanityCheckRunning = False
, lastSanityCheck = Just now
}
return r
showerr e = do
liftAnnex $ warning $ show e
return False
{- Only run one check per day, from the time of the last check. -}
waitForNextCheck :: Assistant ()
waitForNextCheck = do
v <- lastSanityCheck <$> getDaemonStatus
now <- liftIO getPOSIXTime
liftIO $ threadDelaySeconds $ Seconds $ calcdelay now v
where
calcdelay _ Nothing = oneDay
calcdelay now (Just lastcheck)
| lastcheck < now = max oneDay $
oneDay - truncate (now - lastcheck)
| otherwise = oneDay
{- It's important to stay out of the Annex monad as much as possible while
- running potentially expensive parts of this check, since remaining in it
- will block the watcher. -}
dailyCheck :: UrlRenderer -> Assistant Bool
dailyCheck urlrenderer = do
checkRepoExists
g <- liftAnnex gitRepo
batchmaker <- liftIO getBatchCommandMaker
-- Find old unstaged symlinks, and add them to git.
(unstaged, cleanup) <- liftIO $ Git.LsFiles.notInRepo False ["."] g
now <- liftIO getPOSIXTime
forM_ unstaged $ \file -> do
ms <- liftIO $ catchMaybeIO $ getSymbolicLinkStatus file
case ms of
Just s | toonew (statusChangeTime s) now -> noop
| isSymbolicLink s -> addsymlink file ms
_ -> noop
liftIO $ void cleanup
{- Allow git-gc to run once per day. More frequent gc is avoided
- by default to avoid slowing things down. Only run repacks when 100x
- the usual number of loose objects are present; we tend
- to have a lot of small objects and they should not be a
- significant size. -}
when (Git.Config.getMaybe "gc.auto" g == Just "0") $
liftIO $ void $ Git.Command.Batch.run batchmaker
[ Param "-c", Param "gc.auto=670000"
, Param "gc"
, Param "--auto"
] g
{- Check if the unused files found last time have been dealt with. -}
checkOldUnused urlrenderer
{- Run git-annex unused once per day. This is run as a separate
- process to stay out of the annex monad and so it can run as a
- batch job. -}
program <- liftIO readProgramFile
let (program', params') = batchmaker (program, [Param "unused"])
void $ liftIO $ boolSystem program' params'
{- Invalidate unused keys cache, and queue transfers of all unused
- keys, or if no transfers are called for, drop them. -}
unused <- liftAnnex unusedKeys'
void $ liftAnnex $ setUnusedKeys unused
forM_ unused $ \k -> do
unlessM (queueTransfers "unused" Later k Nothing Upload) $
handleDrops "unused" True k Nothing Nothing
return True
where
toonew timestamp now = now < (realToFrac (timestamp + slop) :: POSIXTime)
slop = fromIntegral tenMinutes
insanity msg = do
liftAnnex $ warning msg
void $ addAlert $ sanityCheckFixAlert msg
addsymlink file s = do
isdirect <- liftAnnex isDirect
Watcher.runHandler (Watcher.onAddSymlink isdirect) file s
insanity $ "found unstaged symlink: " ++ file
hourlyCheck :: Assistant ()
hourlyCheck = do
checkRepoExists
#ifndef mingw32_HOST_OS
checkLogSize 0
#else
noop
#endif
#ifndef mingw32_HOST_OS
{- Rotate logs once when total log file size is > 2 mb.
-
- If total log size is larger than the amount of free disk space,
- continue rotating logs until size is < 2 mb, even if this
- results in immediately losing the just logged data.
-}
checkLogSize :: Int -> Assistant ()
checkLogSize n = do
f <- liftAnnex $ fromRepo gitAnnexLogFile
logs <- liftIO $ listLogs f
totalsize <- liftIO $ sum <$> mapM filesize logs
when (totalsize > 2 * oneMegabyte) $ do
notice ["Rotated logs due to size:", show totalsize]
liftIO $ openLog f >>= handleToFd >>= redirLog
when (n < maxLogs + 1) $ do
df <- liftIO $ getDiskFree $ takeDirectory f
case df of
Just free
| free < fromIntegral totalsize ->
checkLogSize (n + 1)
_ -> noop
where
filesize f = fromIntegral . fileSize <$> liftIO (getFileStatus f)
oneMegabyte :: Int
oneMegabyte = 1000000
#endif
oneHour :: Int
oneHour = 60 * 60
oneDay :: Int
oneDay = 24 * oneHour
{- If annex.expireunused is set, find any keys that have lingered unused
- for the specified duration, and remove them.
-
- Otherwise, check to see if unused keys are piling up, and let the user
- know. -}
checkOldUnused :: UrlRenderer -> Assistant ()
checkOldUnused urlrenderer = go =<< annexExpireUnused <$> liftAnnex Annex.getGitConfig
where
go (Just Nothing) = noop
go (Just (Just expireunused)) = expireUnused (Just expireunused)
go Nothing = maybe noop prompt =<< describeUnusedWhenBig
prompt msg =
#ifdef WITH_WEBAPP
do
button <- mkAlertButton True (T.pack "Configure") urlrenderer ConfigUnusedR
void $ addAlert $ unusedFilesAlert [button] $ T.unpack $ renderTense Present msg
#else
debug [show $ renderTense Past msg]
#endif
{- Files may be left in misctmp by eg, an interrupted add of files
- by the assistant, which hard links files to there as part of lockdown
- checks. Delete these files if they're more than a day old.
-
- Note that this is not safe to run after the Watcher starts up, since it
- will create such files, and due to hard linking they may have old
- mtimes. So, this should only be called from the
- sanityCheckerStartupThread, which runs before the Watcher starts up.
-
- Also, if a git-annex add is being run at the same time the assistant
- starts up, its tmp files could be deleted. However, the watcher will
- come along and add everything once it starts up anyway, so at worst
- this would make the git-annex add fail unexpectedly.
-}
cleanOldTmpMisc :: Annex ()
cleanOldTmpMisc = do
now <- liftIO getPOSIXTime
let oldenough = now - (60 * 60 * 24)
tmp <- fromRepo gitAnnexTmpMiscDir
liftIO $ mapM_ (cleanOld (<= oldenough)) =<< dirContentsRecursive tmp
{- While .git/annex/tmp is now only used for storing partially transferred
- objects, older versions of git-annex used it for misctemp. Clean up any
- files that might be left from that, by looking for files whose names
- cannot be the key of an annexed object. Only delete files older than
- 1 week old.
-
- Also, some remotes such as rsync may use this temp directory for storing
- eg, encrypted objects that are being transferred. So, delete old
- objects that use a GPGHMAC backend.
-}
cleanReallyOldTmp :: Annex ()
cleanReallyOldTmp = do
now <- liftIO getPOSIXTime
let oldenough = now - (60 * 60 * 24 * 7)
tmp <- fromRepo gitAnnexTmpObjectDir
liftIO $ mapM_ (cleanjunk (<= oldenough)) =<< dirContentsRecursive tmp
where
cleanjunk check f = case fileKey (takeFileName f) of
Nothing -> cleanOld check f
Just k
| "GPGHMAC" `isPrefixOf` keyBackendName k ->
cleanOld check f
| otherwise -> noop
cleanOld :: (POSIXTime -> Bool) -> FilePath -> IO ()
cleanOld check f = go =<< catchMaybeIO getmtime
where
getmtime = realToFrac . modificationTime <$> getSymbolicLinkStatus f
go (Just mtime) | check mtime = nukeFile f
go _ = noop
checkRepoExists :: Assistant ()
checkRepoExists = do
g <- liftAnnex gitRepo
liftIO $ unlessM (doesDirectoryExist $ Git.repoPath g) $
terminateSelf
|