1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
|
{- git-annex file content managing
-
- Copyright 2010 Joey Hess <joey@kitenet.net>
-
- Licensed under the GNU GPL version 3 or higher.
-}
module Annex.Content (
inAnnex,
inAnnexSafe,
lockContent,
calcGitLink,
logStatus,
getViaTmp,
getViaTmpUnchecked,
withTmp,
checkDiskSpace,
moveAnnex,
removeAnnex,
fromAnnex,
moveBad,
getKeysPresent,
saveState,
downloadUrl,
preseedTmp,
freezeContent,
thawContent,
freezeContentDir,
) where
import System.IO.Unsafe (unsafeInterleaveIO)
import Common.Annex
import Logs.Location
import Annex.UUID
import qualified Git
import qualified Git.Config
import qualified Annex
import qualified Annex.Queue
import qualified Annex.Branch
import Utility.DiskFree
import Utility.FileMode
import qualified Utility.Url as Url
import Types.Key
import Utility.DataUnits
import Utility.CopyFile
import Config
import Annex.Exception
import Git.SharedRepository
import Annex.Perms
{- Checks if a given key's content is currently present. -}
inAnnex :: Key -> Annex Bool
inAnnex = inAnnex' doesFileExist
inAnnex' :: (FilePath -> IO a) -> Key -> Annex a
inAnnex' a key = do
whenM (fromRepo Git.repoIsUrl) $
error "inAnnex cannot check remote repo"
inRepo $ \g -> gitAnnexLocation key g >>= a
{- A safer check; the key's content must not only be present, but
- is not in the process of being removed. -}
inAnnexSafe :: Key -> Annex (Maybe Bool)
inAnnexSafe = inAnnex' $ \f -> openforlock f >>= check
where
openforlock f = catchMaybeIO $
openFd f ReadOnly Nothing defaultFileFlags
check Nothing = return is_missing
check (Just h) = do
v <- getLock h (ReadLock, AbsoluteSeek, 0, 0)
closeFd h
return $ case v of
Just _ -> is_locked
Nothing -> is_unlocked
is_locked = Nothing
is_unlocked = Just True
is_missing = Just False
{- Content is exclusively locked while running an action that might remove
- it. (If the content is not present, no locking is done.) -}
lockContent :: Key -> Annex a -> Annex a
lockContent key a = do
file <- inRepo $ gitAnnexLocation key
bracketIO (openforlock file >>= lock) unlock a
where
{- Since files are stored with the write bit disabled, have
- to fiddle with permissions to open for an exclusive lock. -}
openforlock f = catchMaybeIO $ ifM (doesFileExist f)
( withModifiedFileMode f
(`unionFileModes` ownerWriteMode)
open
, open
)
where
open = openFd f ReadWrite Nothing defaultFileFlags
lock Nothing = return Nothing
lock (Just fd) = do
v <- tryIO $ setLock fd (WriteLock, AbsoluteSeek, 0, 0)
case v of
Left _ -> error "content is locked"
Right _ -> return $ Just fd
unlock Nothing = noop
unlock (Just l) = closeFd l
{- Calculates the relative path to use to link a file to a key. -}
calcGitLink :: FilePath -> Key -> Annex FilePath
calcGitLink file key = do
cwd <- liftIO getCurrentDirectory
let absfile = fromMaybe whoops $ absNormPath cwd file
loc <- inRepo $ gitAnnexLocation key
return $ relPathDirToFile (parentDir absfile) loc
where
whoops = error $ "unable to normalize " ++ file
{- Updates the Logs.Location when a key's presence changes in the current
- repository. -}
logStatus :: Key -> LogStatus -> Annex ()
logStatus key status = do
u <- getUUID
logChange key u status
{- Runs an action, passing it a temporary filename to get,
- and if the action succeeds, moves the temp file into
- the annex as a key's content. -}
getViaTmp :: Key -> (FilePath -> Annex Bool) -> Annex Bool
getViaTmp key action = do
tmp <- fromRepo $ gitAnnexTmpLocation key
-- Check that there is enough free disk space.
-- When the temp file already exists, count the space
-- it is using as free.
e <- liftIO $ doesFileExist tmp
alreadythere <- if e
then fromIntegral . fileSize <$> liftIO (getFileStatus tmp)
else return 0
ifM (checkDiskSpace Nothing key alreadythere)
( do
when e $ thawContent tmp
getViaTmpUnchecked key action
, return False
)
prepTmp :: Key -> Annex FilePath
prepTmp key = do
tmp <- fromRepo $ gitAnnexTmpLocation key
createAnnexDirectory (parentDir tmp)
return tmp
{- Like getViaTmp, but does not check that there is enough disk space
- for the incoming key. For use when the key content is already on disk
- and not being copied into place. -}
getViaTmpUnchecked :: Key -> (FilePath -> Annex Bool) -> Annex Bool
getViaTmpUnchecked key action = do
tmp <- prepTmp key
ifM (action tmp)
( do
moveAnnex key tmp
logStatus key InfoPresent
return True
, do
-- the tmp file is left behind, in case caller wants
-- to resume its transfer
return False
)
{- Creates a temp file, runs an action on it, and cleans up the temp file. -}
withTmp :: Key -> (FilePath -> Annex a) -> Annex a
withTmp key action = do
tmp <- prepTmp key
res <- action tmp
liftIO $ nukeFile tmp
return res
{- Checks that there is disk space available to store a given key,
- in a destination (or the annex) printing a warning if not. -}
checkDiskSpace :: Maybe FilePath -> Key -> Integer -> Annex Bool
checkDiskSpace destination key alreadythere = do
reserve <- getDiskReserve
free <- liftIO . getDiskFree =<< dir
force <- Annex.getState Annex.force
case (free, keySize key) of
(Just have, Just need) -> do
let ok = (need + reserve <= have + alreadythere) || force
unless ok $ do
liftIO $ print (need, reserve, have, alreadythere)
needmorespace (need + reserve - have - alreadythere)
return ok
_ -> return True
where
dir = maybe (fromRepo gitAnnexDir) return destination
needmorespace n =
warning $ "not enough free space, need " ++
roughSize storageUnits True n ++
" more" ++ forcemsg
forcemsg = " (use --force to override this check or adjust annex.diskreserve)"
{- Moves a file into .git/annex/objects/
-
- What if the key there already has content? This could happen for
- various reasons; perhaps the same content is being annexed again.
- Perhaps there has been a hash collision generating the keys.
-
- The current strategy is to assume that in this case it's safe to delete
- one of the two copies of the content; and the one already in the annex
- is left there, assuming it's the original, canonical copy.
-
- I considered being more paranoid, and checking that both files had
- the same content. Decided against it because A) users explicitly choose
- a backend based on its hashing properties and so if they're dealing
- with colliding files it's their own fault and B) adding such a check
- would not catch all cases of colliding keys. For example, perhaps
- a remote has a key; if it's then added again with different content then
- the overall system now has two different peices of content for that
- key, and one of them will probably get deleted later. So, adding the
- check here would only raise expectations that git-annex cannot truely
- meet.
-}
moveAnnex :: Key -> FilePath -> Annex ()
moveAnnex key src = do
dest <- inRepo $ gitAnnexLocation key
ifM (liftIO $ doesFileExist dest)
( liftIO $ removeFile src
, do
createContentDir dest
liftIO $ moveFile src dest
freezeContent dest
freezeContentDir dest
)
withObjectLoc :: Key -> ((FilePath, FilePath) -> Annex a) -> Annex a
withObjectLoc key a = do
file <- inRepo $ gitAnnexLocation key
let dir = parentDir file
a (dir, file)
cleanObjectLoc :: Key -> Annex ()
cleanObjectLoc key = do
file <- inRepo $ gitAnnexLocation key
liftIO $ removeparents file (3 :: Int)
where
removeparents _ 0 = noop
removeparents file n = do
let dir = parentDir file
maybe noop (const $ removeparents dir (n-1))
<=< catchMaybeIO $ removeDirectory dir
{- Removes a key's file from .git/annex/objects/ -}
removeAnnex :: Key -> Annex ()
removeAnnex key = withObjectLoc key $ \(dir, file) -> do
liftIO $ do
allowWrite dir
removeFile file
cleanObjectLoc key
{- Moves a key's file out of .git/annex/objects/ -}
fromAnnex :: Key -> FilePath -> Annex ()
fromAnnex key dest = withObjectLoc key $ \(dir, file) -> do
liftIO $ allowWrite dir
thawContent file
liftIO $ moveFile file dest
cleanObjectLoc key
{- Moves a key out of .git/annex/objects/ into .git/annex/bad, and
- returns the file it was moved to. -}
moveBad :: Key -> Annex FilePath
moveBad key = do
src <- inRepo $ gitAnnexLocation key
bad <- fromRepo gitAnnexBadDir
let dest = bad </> takeFileName src
createAnnexDirectory (parentDir dest)
liftIO $ do
allowWrite (parentDir src)
moveFile src dest
cleanObjectLoc key
logStatus key InfoMissing
return dest
{- List of keys whose content exists in .git/annex/objects/ -}
getKeysPresent :: Annex [Key]
getKeysPresent = liftIO . traverse (2 :: Int) =<< fromRepo gitAnnexObjectDir
where
traverse depth dir = do
contents <- catchDefaultIO (dirContents dir) []
if depth == 0
then continue (mapMaybe (fileKey . takeFileName) contents) []
else do
let deeper = traverse (depth - 1)
continue [] (map deeper contents)
continue keys [] = return keys
continue keys (a:as) = do
{- Force lazy traversal with unsafeInterleaveIO. -}
morekeys <- unsafeInterleaveIO a
continue (morekeys++keys) as
{- Things to do to record changes to content when shutting down.
-
- It's acceptable to avoid committing changes to the branch,
- especially if performing a short-lived action.
-}
saveState :: Bool -> Annex ()
saveState oneshot = doSideAction $ do
Annex.Queue.flush
unless oneshot $
ifM alwayscommit
( Annex.Branch.commit "update" , Annex.Branch.stage)
where
alwayscommit = fromMaybe True . Git.Config.isTrue
<$> getConfig (annexConfig "alwayscommit") ""
{- Downloads content from any of a list of urls. -}
downloadUrl :: [Url.URLString] -> FilePath -> Annex Bool
downloadUrl urls file = do
o <- map Param . words <$> getConfig (annexConfig "web-options") ""
headers <- getHttpHeaders
liftIO $ anyM (\u -> Url.download u headers o file) urls
{- Copies a key's content, when present, to a temp file.
- This is used to speed up some rsyncs. -}
preseedTmp :: Key -> FilePath -> Annex Bool
preseedTmp key file = go =<< inAnnex key
where
go False = return False
go True = do
ok <- copy
when ok $ thawContent file
return ok
copy = ifM (liftIO $ doesFileExist file)
( return True
, do
s <- inRepo $ gitAnnexLocation key
liftIO $ copyFileExternal s file
)
{- Blocks writing to an annexed file. The file is made unwritable
- to avoid accidental edits. core.sharedRepository may change
- who can read it. -}
freezeContent :: FilePath -> Annex ()
freezeContent file = liftIO . go =<< fromRepo getSharedRepository
where
go GroupShared = modifyFileMode file $
removeModes writeModes .
addModes [ownerReadMode, groupReadMode]
go AllShared = modifyFileMode file $
removeModes writeModes .
addModes readModes
go _ = preventWrite file
{- Allows writing to an annexed file that freezeContent was called on
- before. -}
thawContent :: FilePath -> Annex ()
thawContent file = liftIO . go =<< fromRepo getSharedRepository
where
go GroupShared = groupWriteRead file
go AllShared = groupWriteRead file
go _ = allowWrite file
{- Blocks writing to the directory an annexed file is in, to prevent the
- file accidentially being deleted. However, if core.sharedRepository
- is set, this is not done, since the group must be allowed to delete the
- file.
-}
freezeContentDir :: FilePath -> Annex ()
freezeContentDir file = liftIO . go =<< fromRepo getSharedRepository
where
dir = parentDir file
go GroupShared = groupWriteRead dir
go AllShared = groupWriteRead dir
go _ = preventWrite dir
{- Makes the directory tree to store an annexed file's content,
- with appropriate permissions on each level. -}
createContentDir :: FilePath -> Annex ()
createContentDir dest = do
unlessM (liftIO $ doesDirectoryExist dir) $
createAnnexDirectory dir
-- might have already existed with restricted perms
liftIO $ allowWrite dir
where
dir = parentDir dest
|