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* set EMAIL when GECOS workaround is neededGravatar Joey Hess2013-05-03
| | | | | | | | | Git fails on Android, because it gets some weird domain for local host like "localhost.(none)". This works around that. I made it always set EMAIL when GECOS workaround was needed (unless EMAIL is already set). It might be nicer to try to get the hostname.domain as git does, and only set it if that fails. But I don't want to be stuck trying to exactly duplicate whatever git is doing.
* thaw content directory in direct mode tooGravatar Joey Hess2013-04-30
| | | | | | | | A content directory can be frozen in direct mode. One way this can happen is if the content is transferred before direct mode has a mapping for it, so it's stored in the content directory. So, we need to thaw the content directory before doing things with it.
* refactorGravatar Joey Hess2013-04-30
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* per-IA-item content directoriesGravatar Joey Hess2013-04-25
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* sync: Bug fix, avoid adding to the annex the dummy symlinks used on crippled ↵Gravatar Joey Hess2013-04-23
| | | | | | | | | | | | | | | | | | | filesystems. The root of the problem is that toInodeCache sees a non-symlink, and so goes on and generates a new inode cache for the dummy symlink. Any place that toInodeCache, or sameFileStatus, or genInodeCache are called may need to deal with this case. Although many of them are ok. For example, prepSendAnnex calls sameInodeCache, which calls genInodeCache.. but if the file content is not present, the InodeCache generated for its standin file is appropriately not the same, and so it returns Nothing. I've audited some, but have to say I'm not happy with this; it should be handled at the type level somehow, or a toInodeCache wrapper be used that is aware of dummy symlinks. (The Watcher already dealt with it, via the guardSymlinkStandin function.)
* expose Control.Monad.joinGravatar Joey Hess2013-04-22
| | | | | I think I've been looking for that function for some time. Ie, I remember wanting to collapse Just Nothing to Nothing.
* Detect systems that have no user name set in GECOS, and also don't have ↵Gravatar Joey Hess2013-04-22
| | | | user.name set in git config, and put in a workaround so that commits to the git-annex branch (and the assistant) will still succeed despite git not liking the system configuration.
* Allow rsync to use other remote shells.Gravatar guilhem2013-04-13
| | | | | | Introduced a new per-remote option 'annex-rsync-transport' to specify the remote shell that it to be used with rsync. In case the value is 'ssh', connections are cached unless 'sshcaching' is unset.
* implement massReplaceGravatar Joey Hess2013-04-08
| | | | | | This looks at the string one char at a time, which is hardly efficient.. but more than good enough for expanding variables in relatively short command lines.
* Added annex.web-download-command setting.Gravatar Joey Hess2013-04-08
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* Bugfix: Direct mode no longer repeatedly checksums duplicated files.Gravatar Joey Hess2013-04-06
| | | | | | | | | | | | | | | | | Fixed by storing a list of cached inodes for a key, instead of just one. Backwards compatability note: An old git-annex version will fail to parse an inode cache file that has been written by a new version, and has multiple items. It will succees if just one. So old git-annexes will have even worse behavior when there are duplicated files, if that is possible. I don't think it will be a problem. (Famous last words.) Also, note that it doesn't expire old and unused inode caches for a key. It would be possible to add this if needed; just look through the associated files for a key and if there are more cached inodes, throw out any not corresponding to associated files. Unless a file is being copied repeatedly and the old copy deleted, this lack of expiry should not be a problem.
* Use lower case hash directories for storing files on crippled filesystems, ↵Gravatar Joey Hess2013-04-04
| | | | | | | | | | | | | | | same as is already done for bare repositories. * since this is a crippled filesystem anyway, git-annex doesn't use symlinks on it * so there's no reason to use the mixed case hash directories that we're stuck using to avoid breaking everyone's symlinks to the content * so we can do what is already done for all bare repos, and make non-bare repos on crippled filesystems use the all-lower case hash directories * which are, happily, all 3 letters long, so they cannot conflict with mixed case hash directories * so I was able to 100% fix this and even resuming `git annex add` in the test case will recover and it will all just work.
* hlintGravatar Joey Hess2013-04-03
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* cleanupGravatar Joey Hess2013-04-02
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* Update working tree files fully atomicallyGravatar Joey Hess2013-04-02
| | | | | | | | | | | This avoids commit churn by the assistant when eg, replacing a file with a symlink. But, just as importantly, it prevents the working tree being left with a deleted file if git-annex, or perhaps the whole system, crashes at the wrong time. (It also probably avoids confusing displays in file managers.)
* New annex.largefiles setting, which configures which files `git annex add` ↵Gravatar Joey Hess2013-03-29
| | | | | | | | | | | | | and the assistant add to the annex. I would have sort of liked to put this in .gitattributes, but it seems it does not support multi-word attribute values. Also, making this a single config setting makes it easy to only parse the expression once. A natural next step would be to make the assistant `git add` files that are not annex.largefiles. OTOH, I don't think `git annex add` should `git add` such files, because git-annex command line tools are not in the business of wrapping git command line tools.
* cleanup debug printGravatar Joey Hess2013-03-28
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* comment typoGravatar Joey Hess2013-03-18
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* move comment to right placeGravatar Joey Hess2013-03-18
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* remove old debug printGravatar Joey Hess2013-03-16
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* Bugfix: Fix bug in inode cache sentinal check, which broke copying to local ↵Gravatar Joey Hess2013-03-12
| | | | repos if the repo being copied from had moved to a different filesystem or otherwise changed all its inodes'
* detect renames during commit, and .. um, do nothing special because it's ↵Gravatar Joey Hess2013-03-11
| | | | | | lunch time But I'm well set up to fast-track direct mode adds for renames now.
* remove Eq instance for InodeCacheGravatar Joey Hess2013-03-11
| | | | | | | | | There are two types of equality here, and which one is right varies, so this forces me to consider and choose between them. Based on this, I learned that the commit in git anex sync was always doing a strong comparison, even when in a repository where the inodes had changed. Fixed that.
* tag xmpp pushes with jidGravatar Joey Hess2013-03-06
| | | | | | | | | | This fixes the issue mentioned in the last commit. Turns out just collecting UUID of clients behind a XMPP remote is insufficient (although I should probably still do it for other reasons), because a single remote repo might be connected via both XMPP and local pairing. So a way is needed to know when a push was received from any client using a given XMPP remote over XMPP, as opposed to via ssh.
* assistant: Get back in sync with XMPP remotes after network reconnection, ↵Gravatar Joey Hess2013-03-06
| | | | | | | | | | | | | | | | | | | | | and on startup. Make manualPull send push requests over XMPP. When reconnecting with remotes, those that are XMPP remotes cannot immediately be pulled from and scanned, so instead maintain a set of (probably) desynced remotes, and put XMPP remotes on it. (This set could be used in other ways later, if we can detect we're out of sync with other types of remotes.) The merger handles detecting when a XMPP push is received from a desynced remote, and triggers a scan then, if they have in fact diverged. This has one known bug: A single XMPP remote can have multiple clients behind it. When this happens, only the UUID of one client is recorded as the UUID of the XMPP remote. Pushes from the other XMPP clients will not trigger a scan. If the client whose UUID is expected responds to the push request, it'll work, but when that client is offline, we're SOL.
* Run ssh with -T to avoid tty allocation and any login scripts that may do ↵Gravatar Joey Hess2013-03-04
| | | | undesired things with it.
* git subcommand cleanupGravatar Joey Hess2013-03-03
| | | | | | Pass subcommand as a regular param, which allows passing git parameters like -c before it. This was already done in the pipeing set of functions, but not the command running set.
* Makefile now builds using cabal, taking advantage of cabal's automatic ↵Gravatar Joey Hess2013-02-27
| | | | | | | | | detection of appropriate build flags. The only thing lost is ./ghci Speed: make fast used to take 20 seconds here, when rebuilding from touching Command/Unused.hs. With cabal, it's 29 seconds.
* annex.version is now set to 4 for direct mode repositoriesGravatar Joey Hess2013-02-26
| | | | | | | To avoid old versions of git-annex getting confused. There is no upgrade required though. We switch back to 3 when going from direct to indirect.
* fixGravatar Joey Hess2013-02-24
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* hopefully fix a bugGravatar Joey Hess2013-02-24
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* remove debug printGravatar Joey Hess2013-02-23
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* squelch warningGravatar Joey Hess2013-02-22
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* fix inverted logicGravatar Joey Hess2013-02-22
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* fix sameInodeCache to check the inode change sentinalGravatar Joey Hess2013-02-22
| | | | | This should fix the problem where the assistant, on Android, re-adds every file on startup.
* work around broken getEnvironment on Android in the most important place: ↵Gravatar Joey Hess2013-02-22
| | | | | | | | git annex init This resulted in a lot of user complains that git annex init had git telling them they needed to run git config --global user.email .. which didn't work because even HOME was not passed into git.
* only create inode sentinal file when initializing a new repoGravatar Joey Hess2013-02-20
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* shorter directory to external ssh socketGravatar Joey Hess2013-02-19
| | | | Before it was too long to be used.
* Direct mode: Support filesystems like FAT which can change their inodes each ↵Gravatar Joey Hess2013-02-19
| | | | time they are mounted.
* Android: Support ssh connection caching.Gravatar Joey Hess2013-02-19
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* set fileSystemEncoding when reading files that might be binaryGravatar Joey Hess2013-02-18
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* hlintGravatar Joey Hess2013-02-18
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* typesGravatar Joey Hess2013-02-18
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* fully support core.symlinks=false in all relevant symlink handling codeGravatar Joey Hess2013-02-17
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Refactored annex link code into nice clean new library. Audited and dealt with calls to createSymbolicLink. Remaining calls are all safe, because: Annex/Link.hs: ( liftIO $ createSymbolicLink linktarget file only when core.symlinks=true Assistant/WebApp/Configurators/Local.hs: createSymbolicLink link link test if symlinks can be made Command/Fix.hs: liftIO $ createSymbolicLink link file command only works in indirect mode Command/FromKey.hs: liftIO $ createSymbolicLink link file command only works in indirect mode Command/Indirect.hs: liftIO $ createSymbolicLink l f refuses to run if core.symlinks=false Init.hs: createSymbolicLink f f2 test if symlinks can be made Remote/Directory.hs: go [file] = catchBoolIO $ createSymbolicLink file f >> return True fast key linking; catches failure to make symlink and falls back to copy Remote/Git.hs: liftIO $ catchBoolIO $ createSymbolicLink loc file >> return True ditto Upgrade/V1.hs: liftIO $ createSymbolicLink link f v1 repos could not be on a filesystem w/o symlinks Audited and dealt with calls to readSymbolicLink. Remaining calls are all safe, because: Annex/Link.hs: ( liftIO $ catchMaybeIO $ readSymbolicLink file only when core.symlinks=true Assistant/Threads/Watcher.hs: ifM ((==) (Just link) <$> liftIO (catchMaybeIO $ readSymbolicLink file)) code that fixes real symlinks when inotify sees them It's ok to not fix psdueo-symlinks. Assistant/Threads/Watcher.hs: mlink <- liftIO (catchMaybeIO $ readSymbolicLink file) ditto Command/Fix.hs: stopUnless ((/=) (Just link) <$> liftIO (catchMaybeIO $ readSymbolicLink file)) $ do command only works in indirect mode Upgrade/V1.hs: getsymlink = takeFileName <$> readSymbolicLink file v1 repos could not be on a filesystem w/o symlinks Audited and dealt with calls to isSymbolicLink. (Typically used with getSymbolicLinkStatus, but that is just used because getFileStatus is not as robust; it also works on pseudolinks.) Remaining calls are all safe, because: Assistant/Threads/SanityChecker.hs: | isSymbolicLink s -> addsymlink file ms only handles staging of symlinks that were somehow not staged (might need to be updated to support pseudolinks, but this is only a belt-and-suspenders check anyway, and I've never seen the code run) Command/Add.hs: if isSymbolicLink s || not (isRegularFile s) avoids adding symlinks to the annex, so not relevant Command/Indirect.hs: | isSymbolicLink s -> void $ flip whenAnnexed f $ only allowed on systems that support symlinks Command/Indirect.hs: whenM (liftIO $ not . isSymbolicLink <$> getSymbolicLinkStatus f) $ do ditto Seek.hs:notSymlink f = liftIO $ not . isSymbolicLink <$> getSymbolicLinkStatus f used to find unlocked files, only relevant in indirect mode Utility/FSEvents.hs: | Files.isSymbolicLink s = runhook addSymlinkHook $ Just s Utility/FSEvents.hs: | Files.isSymbolicLink s -> Utility/INotify.hs: | Files.isSymbolicLink s -> Utility/INotify.hs: checkfiletype Files.isSymbolicLink addSymlinkHook f Utility/Kqueue.hs: | Files.isSymbolicLink s = callhook addSymlinkHook (Just s) change all above are lower-level, not relevant Audited and dealt with calls to isSymLink. Remaining calls are all safe, because: Annex/Direct.hs: | isSymLink (getmode item) = This is looking at git diff-tree objects, not files on disk Command/Unused.hs: | isSymLink (LsTree.mode l) = do This is looking at git ls-tree, not file on disk Utility/FileMode.hs:isSymLink :: FileMode -> Bool Utility/FileMode.hs:isSymLink = checkMode symbolicLinkMode low-level Done!!
* proper fix for dropunusedGravatar Joey Hess2013-02-15
| | | | | | | | | | Now getKeysPresent checks that the key's content, not only its directory, exists. In direct mode, the inode cache file is used as a standin for the content. removeAnnex always removes the inode cache file, and drop and move --from always call removeAnnex, even if the object does not seem to be inAnnex, to ensure it's always deleted.
* Revert "Clean up direct mode cache and mapping info when dropping keys."Gravatar Joey Hess2013-02-15
| | | | | | | | | This reverts commit f797939d15a2b414e62b28ccb0bd9e5b77978d76. This was buggy, it caused the direct mode cache to be lost when dropping keys, so when the file is gotten back, it's stored in indirect mode. Note to self: Do not attempt bug fixes at 6 am!
* start to support core.symlinks=falseGravatar Joey Hess2013-02-15
| | | | | Utility functions to handle no symlink mode, and converted Annex.Content to use them; still many other places to convert.
* add: Improved detection of files that are modified while being added.Gravatar Joey Hess2013-02-14
| | | | | | | | | | | | | In indirect mode, now checks the inode cache to detect changes to a file. Note that a file can still be changed if a process has it open for write, after landing in the annex. In direct mode, some checking of the inode cache was done before, but from a much later point, so fewer modifications could be detected. Now it's as good as indirect mode. On crippled filesystems, no lock down is done before starting to add a file, so checking the inode cache is the only protection we have.
* split out Utility.InodeCacheGravatar Joey Hess2013-02-14
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* crippled filesystem support, probing and initial supportGravatar Joey Hess2013-02-14
| | | | | | | | | | | | git annex init probes for crippled filesystems, and sets direct mode, as well as `annex.crippledfilesystem`. Avoid manipulating permissions of files on crippled filesystems. That would likely cause an exception to be thrown. Very basic support in Command.Add for cripped filesystems; avoids the lock down entirely since doing it needs both permissions and hard links. Will make this better soon.