add flags, and change to subcommand style

1 files changed, 3 insertions, 2 deletions

diff --git a/Core.hs b/Core.hs
index 6f05394bb..765b1e6a7 100644
--- a/Core.hs
+++ b/Core.hs
@@ -12,8 +12,9 @@ import qualified GitRepo as Git
 import qualified Annex
 			
 {- Sets up a git repo for git-annex. -}
-setup :: Annex ()
-setup = do
+startup :: [Flag] -> Annex ()
+startup flags = do
+	Annex.flagsChange flags
 	g <- Annex.gitRepo
 	liftIO $ gitAttributes g
 	prepUUID