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+### Please describe the problem.
+git annex status returns:
+
+annexed files in working tree: fatal: git ls-files: cannot generate relative filenames containing '..'
+
+There are unlocked files mixed with locked (symlinked) throughout the repository after a commit. 
+Perhaps my repo is in an inconsistent state?
+
+### What steps will reproduce the problem?
+Run git annex status
+
+### What version of git-annex are you using? On what operating system?
+git-annex version: 4.20131106.  Redhat EL6 running on KVM.
+
+### Please provide any additional information below.
+
+[[!format sh """
+# If you can, paste a complete transcript of the problem occurring here.
+# If the problem is with the git-annex assistant, paste in .git/annex/daemon.log
+[username@box pnt]$ git annex status
+repository mode: indirect
+trusted repositories: 0
+semitrusted repositories: 2
+        00000000-0000-0000-0000-000000000001 -- web
+        1ff41d2d-02bd-4795-88b9-bf3fbbeabef7 -- here
+untrusted repositories: 0
+transfers in progress: none
+available local disk space: 36.86 terabytes (+1 megabyte reserved)
+local annex keys: 35750
+local annex size: 251.11 gigabytes
+annexed files in working tree: fatal: git ls-files: cannot generate relative filenames containing '..'
+0
+size of annexed files in working tree: 0 bytes
+bloom filter size: 16 mebibytes (7.2% full)
+backend usage: 
+        SHA256: 18471
+        SHA256E: 17279
+[username@box pnt]$ git annex version
+git-annex version: 4.20131106
+build flags: Assistant Webapp Pairing Testsuite S3 WebDAV Inotify DBus XMPP DNS Feeds Quvi TDFA CryptoHash
+key/value backends: SHA256E SHA1E SHA512E SHA224E SHA384E SKEIN256E SKEIN512E SHA256 SHA1 SHA512 SHA224 SHA384 SKEIN256 SKEIN512 WORM URL
+remote types: git gcrypt S3 bup directory rsync web webdav glacier hook
+local repository version: 3
+default repository version: 3
+supported repository versions: 3 4
+upgrade supported from repository versions: 0 1 2
+
+# End of transcript or log.
+"""]]