Merge branch 'master' of ssh://git-annex.branchable.com

6 files changed, 70 insertions, 0 deletions

diff --git a/doc/bugs/standalone_builds_shouldn__39__t_pollute___126____47__.ssh_with_helpers_merely_upon_annex_init.mdwn b/doc/bugs/standalone_builds_shouldn__39__t_pollute___126____47__.ssh_with_helpers_merely_upon_annex_init.mdwn
index 5b4032c2f..58c7d71fc 100644
--- a/doc/bugs/standalone_builds_shouldn__39__t_pollute___126____47__.ssh_with_helpers_merely_upon_annex_init.mdwn
+++ b/doc/bugs/standalone_builds_shouldn__39__t_pollute___126____47__.ssh_with_helpers_merely_upon_annex_init.mdwn
@@ -14,3 +14,5 @@ Originally described in http://git-annex.branchable.com/devblog/day_155__missing
 5.20150916+gitg79661ef-1~ndall+1
 
 [[!meta author=yoh]]
+
+Since packaged version suggestively (I think I did check) resolved the issue, marking it as [[done]]
diff --git a/doc/bugs/strips___95___from_extensions_in_E_backends__63__.mdwn b/doc/bugs/strips___95___from_extensions_in_E_backends__63__.mdwn
new file mode 100644
index 000000000..30bda2b23
--- /dev/null
+++ b/doc/bugs/strips___95___from_extensions_in_E_backends__63__.mdwn
@@ -0,0 +1,15 @@
+in my obscure case filename is ds001_R1.1.0_raw.tgz  and resultant extension annex takes for the E backend is .0raw.tgz which is formed from .0_raw.tgz with _ removed.  IMHO if _ is not expected in the extensions, the target extension then should have been just .tgz.  If it does expect/allow for _ in extension -- should have been .0_raw.tgz
+
+[[!format sh """
+# If you can, paste a complete transcript of the problem occurring here.
+# If the problem is with the git-annex assistant, paste in .git/annex/daemon.log
+$> f=ds001_R1.1.0_raw.tgz; rm -rf /tmp/repo1; mkdir /tmp/repo1; cd /tmp/repo1; git init; git annex init ; echo 123>$f; git annex add --backend MD5E $f; ls -ld $f              
+Initialized empty Git repository in /tmp/repo1/.git/
+init  ok
+(recording state in git...)
+add ds001_R1.1.0_raw.tgz ok
+(recording state in git...)
+lrwxrwxrwx 1 yoh yoh 126 May 25 14:27 ds001_R1.1.0_raw.tgz -> .git/annex/objects/g5/jW/MD5E-s4--ba1f2511fc30423bdbb183fe33f3dd0f.0raw.tgz/MD5E-s4--ba1f2511fc30423bdbb183fe33f3dd0f.0raw.tgz
+"""]]
+
+[[!meta author=yoh]]
diff --git a/doc/todo/Store_git_pack_files_on_special_remotes.mdwn b/doc/todo/Store_git_pack_files_on_special_remotes.mdwn
new file mode 100644
index 000000000..e4a86c752
--- /dev/null
+++ b/doc/todo/Store_git_pack_files_on_special_remotes.mdwn
@@ -0,0 +1 @@
+It would be nice to be able to upload and download git history with special remotes.  This could be a move towards full special remote syncing.
diff --git a/doc/todo/add_option_to_whereis_to_avoid_network_interactions.mdwn b/doc/todo/add_option_to_whereis_to_avoid_network_interactions.mdwn
index f9516b574..c322660df 100644
--- a/doc/todo/add_option_to_whereis_to_avoid_network_interactions.mdwn
+++ b/doc/todo/add_option_to_whereis_to_avoid_network_interactions.mdwn
@@ -18,3 +18,4 @@ whereis bold.nii.gz
 """]]
 
 [[!meta author=yoh]]
+Was [[done]] by [[Joey]] as of 6.20160524+gitg2b7b2c4-1~ndall+1
diff --git a/doc/todo/make_copy_--fast__faster/comment_2_0c67f467d730a0966b43171de0382c42._comment b/doc/todo/make_copy_--fast__faster/comment_2_0c67f467d730a0966b43171de0382c42._comment
new file mode 100644
index 000000000..6c37e77e5
--- /dev/null
+++ b/doc/todo/make_copy_--fast__faster/comment_2_0c67f467d730a0966b43171de0382c42._comment
@@ -0,0 +1,49 @@
+[[!comment format=mdwn
+ username="https://me.yahoo.com/a/EbvxpTI_xP9Aod7Mg4cwGhgjrCrdM5s-#7c0f4"
+ subject="comment 2"
+ date="2016-05-25T01:09:56Z"
+ content="""
+\"to remote host \"  so it was \"--to\". annex is already aware of having those files in that remote (see below).
+
+[[!format sh \"\"\"
+$> git annex copy --to=datalad-public --fast .        
+git annex copy --to=datalad-public --fast .  7.33s user 0.91s system 55% cpu 14.772 total
+
+$> git annex info
+repository mode: indirect
+trusted repositories: 0
+semitrusted repositories: 5
+	00000000-0000-0000-0000-000000000001 -- web
+ 	00000000-0000-0000-0000-000000000002 -- bittorrent
+ 	123c73e5-a8dc-4cff-8ffc-679c7ea67f94 -- yoh@smaug:/mnt/datasets/datalad/crawl/neurovault [here]
+ 	48c1556f-6241-45de-9497-338d437fcb62 -- yoh@falkor:/srv/datasets.datalad.org/www/neurovault/snapshots [datalad-public]
+ 	af2785da-2538-4346-a6f6-f2f30fc3f025 -- [datalad-archives]
+untrusted repositories: 0
+transfers in progress: none
+available local disk space: 31.42 terabytes (+1 megabyte reserved)
+local annex keys: 6615
+local annex size: 12.77 gigabytes
+annexed files in working tree: 6628
+size of annexed files in working tree: 6.31 gigabytes
+bloom filter size: 32 mebibytes (1.3% full)
+backend usage: 
+	SHA256E: 6628
+
+$> git annex whereis | head -30               
+whereis 1003/13873.nii.gz (3 copies) 
+  	123c73e5-a8dc-4cff-8ffc-679c7ea67f94 -- yoh@smaug:/mnt/datasets/datalad/crawl/neurovault [here]
+   	48c1556f-6241-45de-9497-338d437fcb62 -- yoh@falkor:/srv/datasets.datalad.org/www/neurovault/snapshots [datalad-public]
+   	af2785da-2538-4346-a6f6-f2f30fc3f025 -- [datalad-archives]
+
+  datalad-archives: dl+archive:SHA256E-s6460020224--710cc05117e2290e2f793271d11e26452cdc111121e09a937dbf5a34b3cc0107.tar/neurovault_snapshot/1003/13873.nii.gz#size=23262
+ok
+whereis 1003/13874.nii.gz (3 copies) 
+  	123c73e5-a8dc-4cff-8ffc-679c7ea67f94 -- yoh@smaug:/mnt/datasets/datalad/crawl/neurovault [here]
+   	48c1556f-6241-45de-9497-338d437fcb62 -- yoh@falkor:/srv/datasets.datalad.org/www/neurovault/snapshots [datalad-public]
+   	af2785da-2538-4346-a6f6-f2f30fc3f025 -- [datalad-archives]
+...
+> git annex copy --to=datalad-public .       
+copy 1003/13873.nii.gz (checking datalad-public...) yoh@datasets.datalad.org's password: 
+
+\"\"\"]]
+"""]]
diff --git a/doc/todo/parallel_get.mdwn b/doc/todo/parallel_get.mdwn
index 073496437..fb3f8d098 100644
--- a/doc/todo/parallel_get.mdwn
+++ b/doc/todo/parallel_get.mdwn
@@ -81,3 +81,5 @@ See also: [[parallel_possibilities]]
 >> Waiting on some updates to ascii-progress. --[[Joey]]
 
 >>> Wrote concurrent-output; [[done]] --[[Joey]]
+
+[[!meta author=yoh]]