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authorGravatar Gael Guennebaud <g.gael@free.fr>2011-06-22 14:39:11 +0200
committerGravatar Gael Guennebaud <g.gael@free.fr>2011-06-22 14:39:11 +0200
commit3ecf7e8f6ea95e1dbf9c65ff6b44fd543fcd0de7 (patch)
tree70e40248fd0465413d73eb98700c21a4f7300993 /unsupported
parent7aabce7c769adc0ad02e45e7ffe7590c5d1412d1 (diff)
add a KroneckerProduct module (unsupported) from Kolja Brix and Andreas Platen materials.
Diffstat (limited to 'unsupported')
-rw-r--r--unsupported/Eigen/CMakeLists.txt2
-rw-r--r--unsupported/Eigen/KroneckerProduct26
-rw-r--r--unsupported/Eigen/src/CMakeLists.txt1
-rw-r--r--unsupported/Eigen/src/KroneckerProduct/CMakeLists.txt6
-rw-r--r--unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h168
-rw-r--r--unsupported/test/CMakeLists.txt1
-rw-r--r--unsupported/test/kronecker_product.cpp194
7 files changed, 397 insertions, 1 deletions
diff --git a/unsupported/Eigen/CMakeLists.txt b/unsupported/Eigen/CMakeLists.txt
index 219ec8ead..1618525d5 100644
--- a/unsupported/Eigen/CMakeLists.txt
+++ b/unsupported/Eigen/CMakeLists.txt
@@ -1,6 +1,6 @@
set(Eigen_HEADERS AdolcForward BVH IterativeSolvers MatrixFunctions MoreVectorization AutoDiff AlignedVector3 Polynomials
CholmodSupport FFT NonLinearOptimization SparseExtra SuperLUSupport UmfPackSupport IterativeSolvers
- NumericalDiff Skyline MPRealSupport OpenGLSupport
+ NumericalDiff Skyline MPRealSupport OpenGLSupport KroneckerProduct
)
install(FILES
diff --git a/unsupported/Eigen/KroneckerProduct b/unsupported/Eigen/KroneckerProduct
new file mode 100644
index 000000000..291c7fabc
--- /dev/null
+++ b/unsupported/Eigen/KroneckerProduct
@@ -0,0 +1,26 @@
+#ifndef EIGEN_KRONECKER_PRODUCT_MODULE_H
+#define EIGEN_KRONECKER_PRODUCT_MODULE_H
+
+#include "../../Eigen/Core"
+
+#include "../../Eigen/src/Core/util/DisableStupidWarnings.h"
+
+namespace Eigen {
+
+/** \ingroup Unsupported_modules
+ * \defgroup KroneckerProduct_Module KroneckerProduct module
+ *
+ * This module contains an experimental Kronecker product implementation.
+ *
+ * \code
+ * #include <Eigen/KroneckerProduct>
+ * \endcode
+ */
+
+#include "src/KroneckerProduct/KroneckerTensorProduct.h"
+
+} // namespace Eigen
+
+#include "../../Eigen/src/Core/util/ReenableStupidWarnings.h"
+
+#endif // EIGEN_KRONECKER_PRODUCT_MODULE_H
diff --git a/unsupported/Eigen/src/CMakeLists.txt b/unsupported/Eigen/src/CMakeLists.txt
index cd442cefa..6fd98b310 100644
--- a/unsupported/Eigen/src/CMakeLists.txt
+++ b/unsupported/Eigen/src/CMakeLists.txt
@@ -9,3 +9,4 @@ ADD_SUBDIRECTORY(NumericalDiff)
ADD_SUBDIRECTORY(Polynomials)
ADD_SUBDIRECTORY(Skyline)
ADD_SUBDIRECTORY(SparseExtra)
+ADD_SUBDIRECTORY(KroneckerProduct) \ No newline at end of file
diff --git a/unsupported/Eigen/src/KroneckerProduct/CMakeLists.txt b/unsupported/Eigen/src/KroneckerProduct/CMakeLists.txt
new file mode 100644
index 000000000..4daefebee
--- /dev/null
+++ b/unsupported/Eigen/src/KroneckerProduct/CMakeLists.txt
@@ -0,0 +1,6 @@
+FILE(GLOB Eigen_KroneckerProduct_SRCS "*.h")
+
+INSTALL(FILES
+ ${Eigen_KroneckerProduct_SRCS}
+ DESTINATION ${INCLUDE_INSTALL_DIR}/unsupported/Eigen/src/KroneckerProduct COMPONENT Devel
+ )
diff --git a/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h b/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h
new file mode 100644
index 000000000..cc5f271f0
--- /dev/null
+++ b/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h
@@ -0,0 +1,168 @@
+// This file is part of Eigen, a lightweight C++ template library
+// for linear algebra.
+//
+// Copyright (C) 2011 Kolja Brix <brix@igpm.rwth-aachen.de>
+// Copyright (C) 2011 Andreas Platen <andiplaten@gmx.de>
+//
+// Eigen is free software; you can redistribute it and/or
+// modify it under the terms of the GNU Lesser General Public
+// License as published by the Free Software Foundation; either
+// version 3 of the License, or (at your option) any later version.
+//
+// Alternatively, you can redistribute it and/or
+// modify it under the terms of the GNU General Public License as
+// published by the Free Software Foundation; either version 2 of
+// the License, or (at your option) any later version.
+//
+// Eigen is distributed in the hope that it will be useful, but WITHOUT ANY
+// WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS
+// FOR A PARTICULAR PURPOSE. See the GNU Lesser General Public License or the
+// GNU General Public License for more details.
+//
+// You should have received a copy of the GNU Lesser General Public
+// License and a copy of the GNU General Public License along with
+// Eigen. If not, see <http://www.gnu.org/licenses/>.
+
+
+#ifndef KRONECKER_TENSOR_PRODUCT_H
+#define KRONECKER_TENSOR_PRODUCT_H
+
+
+namespace internal {
+
+/*!
+ * Kronecker tensor product helper function for dense matrices
+ *
+ * \param A Dense matrix A
+ * \param B Dense matrix B
+ * \param AB_ Kronecker tensor product of A and B
+ */
+template<typename Derived_A, typename Derived_B, typename Derived_AB>
+void kroneckerProduct_full(const Derived_A& A, const Derived_B& B, Derived_AB & AB)
+{
+ const unsigned int Ar = A.rows(),
+ Ac = A.cols(),
+ Br = B.rows(),
+ Bc = B.cols();
+ for (unsigned int i=0; i<Ar; ++i)
+ for (unsigned int j=0; j<Ac; ++j)
+ AB.block(i*Br,j*Bc,Br,Bc) = A(i,j)*B;
+}
+
+
+/*!
+ * Kronecker tensor product helper function for matrices, where at least one is sparse
+ *
+ * \param A Matrix A
+ * \param B Matrix B
+ * \param AB_ Kronecker tensor product of A and B
+ */
+template<typename Derived_A, typename Derived_B, typename Derived_AB>
+void kroneckerProduct_sparse(const Derived_A &A, const Derived_B &B, Derived_AB &AB)
+{
+ const unsigned int Ar = A.rows(),
+ Ac = A.cols(),
+ Br = B.rows(),
+ Bc = B.cols();
+ AB.resize(Ar*Br,Ac*Bc);
+ AB.resizeNonZeros(0);
+ AB.reserve(A.nonZeros()*B.nonZeros());
+
+ for (int kA=0; kA<A.outerSize(); ++kA)
+ {
+ for (int kB=0; kB<B.outerSize(); ++kB)
+ {
+ for (typename Derived_A::InnerIterator itA(A,kA); itA; ++itA)
+ {
+ for (typename Derived_B::InnerIterator itB(B,kB); itB; ++itB)
+ {
+ const unsigned int iA = itA.row(),
+ jA = itA.col(),
+ iB = itB.row(),
+ jB = itB.col(),
+ i = iA*Br + iB,
+ j = jA*Bc + jB;
+ AB.insert(i,j) = itA.value() * itB.value();
+ }
+ }
+ }
+ }
+}
+
+} // end namespace internal
+
+
+
+/*!
+ * Computes Kronecker tensor product of two dense matrices
+ *
+ * \param a Dense matrix a
+ * \param b Dense matrix b
+ * \param c Kronecker tensor product of a and b
+ */
+template<typename A,typename B,typename CScalar,int CRows,int CCols, int COptions, int CMaxRows, int CMaxCols>
+void kroneckerProduct(const MatrixBase<A>& a, const MatrixBase<B>& b, Matrix<CScalar,CRows,CCols,COptions,CMaxRows,CMaxCols>& c)
+{
+ c.resize(a.rows()*b.rows(),a.cols()*b.cols());
+ internal::kroneckerProduct_full(a.derived(), b.derived(), c);
+}
+
+/*!
+ * Computes Kronecker tensor product of two dense matrices
+ *
+ * Remark: this function uses the const cast hack and has been
+ * implemented to make the function call possible, where the
+ * output matrix is a submatrix, e.g.
+ * kroneckerProduct(A,B,AB.block(2,5,6,6));
+ *
+ * \param a Dense matrix a
+ * \param b Dense matrix b
+ * \param c Kronecker tensor product of a and b
+ */
+template<typename A,typename B,typename C>
+void kroneckerProduct(const MatrixBase<A>& a, const MatrixBase<B>& b, MatrixBase<C> const & c_)
+{
+ MatrixBase<C>& c = const_cast<MatrixBase<C>& >(c_);
+ internal::kroneckerProduct_full(a.derived(), b.derived(), c.derived());
+}
+
+/*!
+ * Computes Kronecker tensor product of a dense and a sparse matrix
+ *
+ * \param a Dense matrix a
+ * \param b Sparse matrix b
+ * \param c Kronecker tensor product of a and b
+ */
+template<typename A,typename B,typename C>
+void kroneckerProduct(const MatrixBase<A>& a, const SparseMatrixBase<B>& b, SparseMatrixBase<C>& c)
+{
+ internal::kroneckerProduct_sparse(a.derived(), b.derived(), c.derived());
+}
+
+/*!
+ * Computes Kronecker tensor product of a sparse and a dense matrix
+ *
+ * \param a Sparse matrix a
+ * \param b Dense matrix b
+ * \param c Kronecker tensor product of a and b
+ */
+template<typename A,typename B,typename C>
+void kroneckerProduct(const SparseMatrixBase<A>& a, const MatrixBase<B>& b, SparseMatrixBase<C>& c)
+{
+ internal::kroneckerProduct_sparse(a.derived(), b.derived(), c.derived());
+}
+
+/*!
+ * Computes Kronecker tensor product of two sparse matrices
+ *
+ * \param a Sparse matrix a
+ * \param b Sparse matrix b
+ * \param c Kronecker tensor product of a and b
+ */
+template<typename A,typename B,typename C>
+void kroneckerProduct(const SparseMatrixBase<A>& a, const SparseMatrixBase<B>& b, SparseMatrixBase<C>& c)
+{
+ internal::kroneckerProduct_sparse(a.derived(), b.derived(), c.derived());
+}
+
+#endif // KRONECKER_TENSOR_PRODUCT_H
diff --git a/unsupported/test/CMakeLists.txt b/unsupported/test/CMakeLists.txt
index 5452dd819..e0df35177 100644
--- a/unsupported/test/CMakeLists.txt
+++ b/unsupported/test/CMakeLists.txt
@@ -138,3 +138,4 @@ endif(GSL_FOUND)
ei_add_test(polynomialsolver " " "${GSL_LIBRARIES}" )
ei_add_test(polynomialutils)
+ei_add_test(kronecker_product)
diff --git a/unsupported/test/kronecker_product.cpp b/unsupported/test/kronecker_product.cpp
new file mode 100644
index 000000000..3c7a6629f
--- /dev/null
+++ b/unsupported/test/kronecker_product.cpp
@@ -0,0 +1,194 @@
+// This file is part of Eigen, a lightweight C++ template library
+// for linear algebra.
+//
+// Copyright (C) 2011 Kolja Brix <brix@igpm.rwth-aachen.de>
+// Copyright (C) 2011 Andreas Platen <andiplaten@gmx.de>
+//
+// Eigen is free software; you can redistribute it and/or
+// modify it under the terms of the GNU Lesser General Public
+// License as published by the Free Software Foundation; either
+// version 3 of the License, or (at your option) any later version.
+//
+// Alternatively, you can redistribute it and/or
+// modify it under the terms of the GNU General Public License as
+// published by the Free Software Foundation; either version 2 of
+// the License, or (at your option) any later version.
+//
+// Eigen is distributed in the hope that it will be useful, but WITHOUT ANY
+// WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS
+// FOR A PARTICULAR PURPOSE. See the GNU Lesser General Public License or the
+// GNU General Public License for more details.
+//
+// You should have received a copy of the GNU Lesser General Public
+// License and a copy of the GNU General Public License along with
+// Eigen. If not, see <http://www.gnu.org/licenses/>.
+
+
+#include "sparse.h"
+#include <Eigen/SparseExtra>
+#include <Eigen/KroneckerProduct>
+
+
+template<typename MatrixType>
+void check_dimension(const MatrixType& ab, const unsigned int rows, const unsigned int cols)
+{
+ VERIFY_IS_EQUAL(ab.rows(), rows);
+ VERIFY_IS_EQUAL(ab.cols(), cols);
+}
+
+
+template<typename MatrixType>
+void check_kronecker_product(const MatrixType& ab)
+{
+ VERIFY_IS_EQUAL(ab.rows(), 6);
+ VERIFY_IS_EQUAL(ab.cols(), 6);
+ VERIFY_IS_EQUAL(ab.nonZeros(), 36);
+ VERIFY_IS_APPROX(ab.coeff(0,0), -0.4017367630386106);
+ VERIFY_IS_APPROX(ab.coeff(0,1), 0.1056863433932735);
+ VERIFY_IS_APPROX(ab.coeff(0,2), -0.7255206194554212);
+ VERIFY_IS_APPROX(ab.coeff(0,3), 0.1908653336744706);
+ VERIFY_IS_APPROX(ab.coeff(0,4), 0.350864567234111);
+ VERIFY_IS_APPROX(ab.coeff(0,5), -0.0923032108308013);
+ VERIFY_IS_APPROX(ab.coeff(1,0), 0.415417514804677);
+ VERIFY_IS_APPROX(ab.coeff(1,1), -0.2369227701722048);
+ VERIFY_IS_APPROX(ab.coeff(1,2), 0.7502275131458511);
+ VERIFY_IS_APPROX(ab.coeff(1,3), -0.4278731019742696);
+ VERIFY_IS_APPROX(ab.coeff(1,4), -0.3628129162264507);
+ VERIFY_IS_APPROX(ab.coeff(1,5), 0.2069210808481275);
+ VERIFY_IS_APPROX(ab.coeff(2,0), 0.05465890160863986);
+ VERIFY_IS_APPROX(ab.coeff(2,1), -0.2634092511419858);
+ VERIFY_IS_APPROX(ab.coeff(2,2), 0.09871180285793758);
+ VERIFY_IS_APPROX(ab.coeff(2,3), -0.4757066334017702);
+ VERIFY_IS_APPROX(ab.coeff(2,4), -0.04773740823058334);
+ VERIFY_IS_APPROX(ab.coeff(2,5), 0.2300535609645254);
+ VERIFY_IS_APPROX(ab.coeff(3,0), -0.8172945853260133);
+ VERIFY_IS_APPROX(ab.coeff(3,1), 0.2150086428359221);
+ VERIFY_IS_APPROX(ab.coeff(3,2), 0.5825113847292743);
+ VERIFY_IS_APPROX(ab.coeff(3,3), -0.1532433770097174);
+ VERIFY_IS_APPROX(ab.coeff(3,4), -0.329383387282399);
+ VERIFY_IS_APPROX(ab.coeff(3,5), 0.08665207912033064);
+ VERIFY_IS_APPROX(ab.coeff(4,0), 0.8451267514863225);
+ VERIFY_IS_APPROX(ab.coeff(4,1), -0.481996458918977);
+ VERIFY_IS_APPROX(ab.coeff(4,2), -0.6023482390791535);
+ VERIFY_IS_APPROX(ab.coeff(4,3), 0.3435339347164565);
+ VERIFY_IS_APPROX(ab.coeff(4,4), 0.3406002157428891);
+ VERIFY_IS_APPROX(ab.coeff(4,5), -0.1942526344200915);
+ VERIFY_IS_APPROX(ab.coeff(5,0), 0.1111982482925399);
+ VERIFY_IS_APPROX(ab.coeff(5,1), -0.5358806424754169);
+ VERIFY_IS_APPROX(ab.coeff(5,2), -0.07925446559335647);
+ VERIFY_IS_APPROX(ab.coeff(5,3), 0.3819388757769038);
+ VERIFY_IS_APPROX(ab.coeff(5,4), 0.04481475387219876);
+ VERIFY_IS_APPROX(ab.coeff(5,5), -0.2159688616158057);
+}
+
+
+template<typename MatrixType>
+void check_sparse_kronecker_product(const MatrixType& ab)
+{
+ VERIFY_IS_EQUAL(ab.rows(), 12);
+ VERIFY_IS_EQUAL(ab.cols(), 10);
+ VERIFY_IS_EQUAL(ab.nonZeros(), 3*2);
+ VERIFY_IS_APPROX(ab.coeff(3,0), -0.04);
+ VERIFY_IS_APPROX(ab.coeff(5,1), 0.05);
+ VERIFY_IS_APPROX(ab.coeff(0,6), -0.08);
+ VERIFY_IS_APPROX(ab.coeff(2,7), 0.10);
+ VERIFY_IS_APPROX(ab.coeff(6,8), 0.12);
+ VERIFY_IS_APPROX(ab.coeff(8,9), -0.15);
+}
+
+
+void test_kronecker_product()
+{
+ // DM = dense matrix; SM = sparse matrix
+ Matrix<double, 2, 3> DM_a;
+ MatrixXd DM_b(3,2);
+ SparseMatrix<double> SM_a(2,3);
+ SparseMatrix<double> SM_b(3,2);
+ SM_a.insert(0,0) = DM_a(0,0) = -0.4461540300782201;
+ SM_a.insert(0,1) = DM_a(0,1) = -0.8057364375283049;
+ SM_a.insert(0,2) = DM_a(0,2) = 0.3896572459516341;
+ SM_a.insert(1,0) = DM_a(1,0) = -0.9076572187376921;
+ SM_a.insert(1,1) = DM_a(1,1) = 0.6469156566545853;
+ SM_a.insert(1,2) = DM_a(1,2) = -0.3658010398782789;
+ SM_b.insert(0,0) = DM_b(0,0) = 0.9004440976767099;
+ SM_b.insert(0,1) = DM_b(0,1) = -0.2368830858139832;
+ SM_b.insert(1,0) = DM_b(1,0) = -0.9311078389941825;
+ SM_b.insert(1,1) = DM_b(1,1) = 0.5310335762980047;
+ SM_b.insert(2,0) = DM_b(2,0) = -0.1225112806872035;
+ SM_b.insert(2,1) = DM_b(2,1) = 0.5903998022741264;
+ SparseMatrix<double,RowMajor> SM_row_a(SM_a), SM_row_b(SM_b);
+
+ // test kroneckerProduct(DM_block,DM,DM_fixedSize)
+ Matrix<double, 6, 6> DM_fix_ab;
+ DM_fix_ab(0,0)=37.0;
+ kroneckerProduct(DM_a.block(0,0,2,3),DM_b,DM_fix_ab);
+ CALL_SUBTEST(check_kronecker_product(DM_fix_ab));
+
+ // test kroneckerProduct(DM,DM,DM_block)
+ MatrixXd DM_block_ab(10,15);
+ DM_block_ab(0,0)=37.0;
+ kroneckerProduct(DM_a,DM_b,DM_block_ab.block(2,5,6,6));
+ CALL_SUBTEST(check_kronecker_product(DM_block_ab.block(2,5,6,6)));
+
+ // test kroneckerProduct(DM,DM,DM)
+ MatrixXd DM_ab(1,5);
+ DM_ab(0,0)=37.0;
+ kroneckerProduct(DM_a,DM_b,DM_ab);
+ CALL_SUBTEST(check_kronecker_product(DM_ab));
+
+ // test kroneckerProduct(SM,DM,SM)
+ SparseMatrix<double> SM_ab(1,20);
+ SM_ab.insert(0,0)=37.0;
+ kroneckerProduct(SM_a,DM_b,SM_ab);
+ CALL_SUBTEST(check_kronecker_product(SM_ab));
+ SparseMatrix<double,RowMajor> SM_ab2(10,3);
+ SM_ab2.insert(0,0)=37.0;
+ kroneckerProduct(SM_a,DM_b,SM_ab2);
+ CALL_SUBTEST(check_kronecker_product(SM_ab2));
+
+ // test kroneckerProduct(DM,SM,SM)
+ SM_ab.insert(0,0)=37.0;
+ kroneckerProduct(DM_a,SM_b,SM_ab);
+ CALL_SUBTEST(check_kronecker_product(SM_ab));
+ SM_ab2.insert(0,0)=37.0;
+ kroneckerProduct(DM_a,SM_b,SM_ab2);
+ CALL_SUBTEST(check_kronecker_product(SM_ab2));
+
+ // test kroneckerProduct(SM,SM,SM)
+ SM_ab.resize(2,33);
+ SM_ab.insert(0,0)=37.0;
+ kroneckerProduct(SM_a,SM_b,SM_ab);
+ CALL_SUBTEST(check_kronecker_product(SM_ab));
+ SM_ab2.resize(5,11);
+ SM_ab2.insert(0,0)=37.0;
+ kroneckerProduct(SM_a,SM_b,SM_ab2);
+ CALL_SUBTEST(check_kronecker_product(SM_ab2));
+
+ // test kroneckerProduct(SM,SM,SM) with sparse pattern
+ SM_a.resize(4,5);
+ SM_b.resize(3,2);
+ SM_a.resizeNonZeros(0);
+ SM_b.resizeNonZeros(0);
+ SM_a.insert(1,0) = -0.1;
+ SM_a.insert(0,3) = -0.2;
+ SM_a.insert(2,4) = 0.3;
+ SM_a.finalize();
+ SM_b.insert(0,0) = 0.4;
+ SM_b.insert(2,1) = -0.5;
+ SM_b.finalize();
+ SM_ab.resize(1,1);
+ SM_ab.insert(0,0)=37.0;
+ kroneckerProduct(SM_a,SM_b,SM_ab);
+ CALL_SUBTEST(check_sparse_kronecker_product(SM_ab));
+
+ // test dimension of result of kroneckerProduct(DM,DM,DM)
+ MatrixXd DM_a2(2,1);
+ MatrixXd DM_b2(5,4);
+ MatrixXd DM_ab2;
+ kroneckerProduct(DM_a2,DM_b2,DM_ab2);
+ CALL_SUBTEST(check_dimension(DM_ab2,2*5,1*4));
+ DM_a2.resize(10,9);
+ DM_b2.resize(4,8);
+ kroneckerProduct(DM_a2,DM_b2,DM_ab2);
+ CALL_SUBTEST(check_dimension(DM_ab2,10*4,9*8));
+}