add/update some benchmark files used to test/compare sparse module features

1 files changed, 104 insertions, 0 deletions

diff --git a/bench/sparse_transpose.cpp b/bench/sparse_transpose.cpp
new file mode 100644
index 000000000..c9aacf5f1
--- /dev/null
+++ b/bench/sparse_transpose.cpp
@@ -0,0 +1,104 @@
+
+//g++ -O3 -g0 -DNDEBUG  sparse_transpose.cpp -I.. -I/home/gael/Coding/LinearAlgebra/mtl4/ -DDENSITY=0.005 -DSIZE=10000 && ./a.out
+// -DNOGMM -DNOMTL
+// -DCSPARSE -I /home/gael/Coding/LinearAlgebra/CSparse/Include/ /home/gael/Coding/LinearAlgebra/CSparse/Lib/libcsparse.a
+
+#ifndef SIZE
+#define SIZE 10000
+#endif
+
+#ifndef DENSITY
+#define DENSITY 0.01
+#endif
+
+#ifndef REPEAT
+#define REPEAT 1
+#endif
+
+#include "BenchSparseUtil.h"
+
+#ifndef MINDENSITY
+#define MINDENSITY 0.0004
+#endif
+
+#ifndef NBTRIES
+#define NBTRIES 10
+#endif
+
+#define BENCH(X) \
+  timer.reset(); \
+  for (int _j=0; _j<NBTRIES; ++_j) { \
+    timer.start(); \
+    for (int _k=0; _k<REPEAT; ++_k) { \
+        X  \
+  } timer.stop(); }
+
+int main(int argc, char *argv[])
+{
+  int rows = SIZE;
+  int cols = SIZE;
+  float density = DENSITY;
+
+  EigenSparseMatrix sm1(rows,cols), sm3(rows,cols);
+
+  BenchTimer timer;
+  for (float density = DENSITY; density>=MINDENSITY; density*=0.5)
+  {
+    fillMatrix(density, rows, cols, sm1);
+
+    // dense matrices
+    #ifdef DENSEMATRIX
+    {
+      DenseMatrix m1(rows,cols), m3(rows,cols);
+      eiToDense(sm1, m1);
+      BENCH(for (int k=0; k<REPEAT; ++k) m3 = m1.transpose();)
+      std::cout << "  Eigen dense:\t" << timer.value() << endl;
+    }
+    #endif
+
+    std::cout << "Non zeros: " << sm1.nonZeros()/float(sm1.rows()*sm1.cols())*100 << "%\n";
+
+    // eigen sparse matrices
+    {
+      BENCH(for (int k=0; k<REPEAT; ++k) sm3 = sm1.transpose();)
+      std::cout << "  Eigen:\t" << timer.value() << endl;
+    }
+
+    // CSparse
+    #ifdef CSPARSE
+    {
+      cs *m1, *m3;
+      eiToCSparse(sm1, m1);
+
+      BENCH(for (int k=0; k<REPEAT; ++k) { m3 = cs_transpose(m1,1); cs_spfree(m3);})
+      std::cout << "  CSparse:\t" << timer.value() << endl;
+    }
+    #endif
+
+    // GMM++
+    #ifndef NOGMM
+    {
+      GmmDynSparse  gmmT3(rows,cols);
+      GmmSparse m1(rows,cols), m3(rows,cols);
+      eiToGmm(sm1, m1);
+      BENCH(for (int k=0; k<REPEAT; ++k) gmm::copy(gmm::transposed(m1),m3);)
+      std::cout << "  GMM:\t\t" << timer.value() << endl;
+    }
+    #endif
+
+    // MTL4
+    #ifndef NOMTL
+    {
+      MtlSparse m1(rows,cols), m3(rows,cols);
+      eiToMtl(sm1, m1);
+      BENCH(for (int k=0; k<REPEAT; ++k) m3 = trans(m1);)
+      std::cout << "  MTL4:\t\t" << timer.value() << endl;
+    }
+    #endif
+
+    std::cout << "\n\n";
+  }
+
+  return 0;
+}
+