[[!comment format=mdwn username="http://joeyh.name/" ip="4.154.2.134" subject="comment 5" date="2013-09-13T18:03:17Z" content=""" Turns out that there was a bug in the Windows port that could lead to the behavior described, and another bug that prevented `git annex fsck` from fixing it. I have fixed both bugs, so you should upgrade and then run `git annex fsck`. """]]