[[!comment format=mdwn username="http://joeyh.name/" ip="4.154.7.238" subject="comment 1" date="2013-01-15T20:20:22Z" content=""" Sounds like a permissions error. Take a look at the repository in `~/Desktop/annex/` or `~/annex/` , and see if it contains files owned by root, or has bad directory permissions that would prevent your normal user from accessing it. Don't forget to check in its `.git` directory. I'd recommend not running the git-annex webapp as root. (There may be valid use cases for root to use git-annex in command-line mode.) """]]