{- git-annex command - - Copyright 2010-2012 Joey Hess - - Licensed under the GNU GPL version 3 or higher. -} {-# LANGUAGE BangPatterns #-} module Command.Unused where import qualified Data.Set as S import qualified Data.ByteString.Lazy as L import Data.BloomFilter import Data.BloomFilter.Easy import Data.BloomFilter.Hash import Control.Monad.ST import Common.Annex import Command import Logs.Unused import Annex.Content import Utility.FileMode import Logs.Location import Config import qualified Annex import qualified Git import qualified Git.Command import qualified Git.Ref import qualified Git.LsFiles as LsFiles import qualified Git.LsTree as LsTree import qualified Backend import qualified Remote import qualified Annex.Branch import qualified Option import Annex.CatFile import Types.Key def :: [Command] def = [withOptions [fromOption] $ command "unused" paramNothing seek "look for unused file content"] fromOption :: Option fromOption = Option.field ['f'] "from" paramRemote "remote to check for unused content" seek :: [CommandSeek] seek = [withNothing start] {- Finds unused content in the annex. -} start :: CommandStart start = do from <- Annex.getField $ Option.name fromOption let (name, action) = case from of Nothing -> (".", checkUnused) Just "." -> (".", checkUnused) Just "here" -> (".", checkUnused) Just n -> (n, checkRemoteUnused n) showStart "unused" name next action checkUnused :: CommandPerform checkUnused = chain 0 [ check "" unusedMsg $ findunused =<< Annex.getState Annex.fast , check "bad" staleBadMsg $ staleKeysPrune gitAnnexBadDir , check "tmp" staleTmpMsg $ staleKeysPrune gitAnnexTmpDir ] where findunused True = do showNote "fast mode enabled; only finding stale files" return [] findunused False = do showAction "checking for unused data" excludeReferenced =<< getKeysPresent chain _ [] = next $ return True chain v (a:as) = do v' <- a v chain v' as checkRemoteUnused :: String -> CommandPerform checkRemoteUnused name = go =<< fromJust <$> Remote.byName (Just name) where go r = do showAction "checking for unused data" _ <- check "" (remoteUnusedMsg r) (remoteunused r) 0 next $ return True remoteunused r = excludeReferenced <=< loggedKeysFor $ Remote.uuid r check :: FilePath -> ([(Int, Key)] -> String) -> Annex [Key] -> Int -> Annex Int check file msg a c = do l <- a let unusedlist = number c l unless (null l) $ showLongNote $ msg unusedlist writeUnusedLog file unusedlist return $ c + length l number :: Int -> [a] -> [(Int, a)] number _ [] = [] number n (x:xs) = (n+1, x) : number (n+1) xs table :: [(Int, Key)] -> [String] table l = " NUMBER KEY" : map cols l where cols (n,k) = " " ++ pad 6 (show n) ++ " " ++ key2file k pad n s = s ++ replicate (n - length s) ' ' staleTmpMsg :: [(Int, Key)] -> String staleTmpMsg t = unlines $ ["Some partially transferred data exists in temporary files:"] ++ table t ++ [dropMsg Nothing] staleBadMsg :: [(Int, Key)] -> String staleBadMsg t = unlines $ ["Some corrupted files have been preserved by fsck, just in case:"] ++ table t ++ [dropMsg Nothing] unusedMsg :: [(Int, Key)] -> String unusedMsg u = unusedMsg' u ["Some annexed data is no longer used by any files:"] [dropMsg Nothing] unusedMsg' :: [(Int, Key)] -> [String] -> [String] -> String unusedMsg' u header trailer = unlines $ header ++ table u ++ ["(To see where data was previously used, try: git log --stat -S'KEY')"] ++ trailer remoteUnusedMsg :: Remote -> [(Int, Key)] -> String remoteUnusedMsg r u = unusedMsg' u ["Some annexed data on " ++ name ++ " is not used by any files:"] [dropMsg $ Just r] where name = Remote.name r dropMsg :: Maybe Remote -> String dropMsg Nothing = dropMsg' "" dropMsg (Just r) = dropMsg' $ " --from " ++ Remote.name r dropMsg' :: String -> String dropMsg' s = "\nTo remove unwanted data: git-annex dropunused" ++ s ++ " NUMBER\n" {- Finds keys in the list that are not referenced in the git repository. - - Strategy: - - * Build a bloom filter of all keys referenced by symlinks. This - is the fastest one to build and will filter out most keys. - * If keys remain, build a second bloom filter of keys referenced by - all branches. - * The list is streamed through these bloom filters lazily, so both will - exist at the same time. This means that twice the memory is used, - but they're relatively small, so the added complexity of using a - mutable bloom filter does not seem worthwhile. - * Generating the second bloom filter can take quite a while, since - it needs enumerating all keys in all git branches. But, the common - case, if the second filter is needed, is for some keys to be globally - unused, and in that case, no short-circuit is possible. - Short-circuiting if the first filter filters all the keys handles the - other common case. -} excludeReferenced :: [Key] -> Annex [Key] excludeReferenced ks = runfilter firstlevel ks >>= runfilter secondlevel where runfilter _ [] = return [] -- optimisation runfilter a l = bloomFilter show l <$> genBloomFilter show a firstlevel = withKeysReferencedM secondlevel = withKeysReferencedInGit {- Finds items in the first, smaller list, that are not - present in the second, larger list. - - Constructing a single set, of the list that tends to be - smaller, appears more efficient in both memory and CPU - than constructing and taking the S.difference of two sets. -} exclude :: Ord a => [a] -> [a] -> [a] exclude [] _ = [] -- optimisation exclude smaller larger = S.toList $ remove larger $ S.fromList smaller where remove a b = foldl (flip S.delete) b a {- A bloom filter capable of holding half a million keys with a - false positive rate of 1 in 1000 uses around 8 mb of memory, - so will easily fit on even my lowest memory systems. -} bloomCapacity :: Annex Int bloomCapacity = fromMaybe 500000 . readish <$> getConfig (annexConfig "bloomcapacity") "" bloomAccuracy :: Annex Int bloomAccuracy = fromMaybe 1000 . readish <$> getConfig (annexConfig "bloomaccuracy") "" bloomBitsHashes :: Annex (Int, Int) bloomBitsHashes = do capacity <- bloomCapacity accuracy <- bloomAccuracy return $ suggestSizing capacity (1/ fromIntegral accuracy) {- Creates a bloom filter, and runs an action, such as withKeysReferenced, - to populate it. - - The action is passed a callback that it can use to feed values into the - bloom filter. - - Once the action completes, the mutable filter is frozen - for later use. -} genBloomFilter :: Hashable t => (v -> t) -> ((v -> Annex ()) -> Annex b) -> Annex (Bloom t) genBloomFilter convert populate = do (numbits, numhashes) <- bloomBitsHashes bloom <- lift $ newMB (cheapHashes numhashes) numbits _ <- populate $ \v -> lift $ insertMB bloom (convert v) lift $ unsafeFreezeMB bloom where lift = liftIO . stToIO bloomFilter :: Hashable t => (v -> t) -> [v] -> Bloom t -> [v] bloomFilter convert l bloom = filter (\k -> convert k `notElemB` bloom) l {- Given an initial value, folds it with each key referenced by - symlinks in the git repo. -} withKeysReferenced :: v -> (Key -> v -> v) -> Annex v withKeysReferenced initial a = withKeysReferenced' initial folda where folda k v = return $ a k v {- Runs an action on each referenced key in the git repo. -} withKeysReferencedM :: (Key -> Annex ()) -> Annex () withKeysReferencedM a = withKeysReferenced' () calla where calla k _ = a k withKeysReferenced' :: v -> (Key -> v -> Annex v) -> Annex v withKeysReferenced' initial a = go initial =<< files where files = ifM isBareRepo ( return [] , do top <- fromRepo Git.repoPath inRepo $ LsFiles.inRepo [top] ) go v [] = return v go v (f:fs) = do x <- Backend.lookupFile f case x of Nothing -> go v fs Just (k, _) -> do !v' <- a k v go v' fs withKeysReferencedInGit :: (Key -> Annex ()) -> Annex () withKeysReferencedInGit a = do rs <- relevantrefs <$> showref forM_ rs (withKeysReferencedInGitRef a) where {- List heads and tags, but not other refs used in syncing. -} showref = inRepo $ Git.Command.pipeRead [Param "show-ref", Param "--heads", Param "--tags"] relevantrefs = map (Git.Ref . snd) . nubBy uniqref . filter ourbranches . map (separate (== ' ')) . lines uniqref (x, _) (y, _) = x == y ourbranchend = '/' : show Annex.Branch.name ourbranches (_, b) = not $ ourbranchend `isSuffixOf` b withKeysReferencedInGitRef :: (Key -> Annex ()) -> Git.Ref -> Annex () withKeysReferencedInGitRef a ref = do showAction $ "checking " ++ Git.Ref.describe ref go <=< inRepo $ LsTree.lsTree ref where go [] = noop go (l:ls) | isSymLink (LsTree.mode l) = do content <- encodeW8 . L.unpack <$> catFile ref (LsTree.file l) case fileKey (takeFileName content) of Nothing -> go ls Just k -> do a k go ls | otherwise = go ls {- Looks in the specified directory for bad/tmp keys, and returns a list - of those that might still have value, or might be stale and removable. - - Also, stale keys that can be proven to have no value are deleted. -} staleKeysPrune :: (Git.Repo -> FilePath) -> Annex [Key] staleKeysPrune dirspec = do contents <- staleKeys dirspec dups <- filterM inAnnex contents let stale = contents `exclude` dups dir <- fromRepo dirspec liftIO $ forM_ dups $ \t -> removeFile $ dir keyFile t return stale staleKeys :: (Git.Repo -> FilePath) -> Annex [Key] staleKeys dirspec = do dir <- fromRepo dirspec ifM (liftIO $ doesDirectoryExist dir) ( do contents <- liftIO $ getDirectoryContents dir files <- liftIO $ filterM doesFileExist $ map (dir ) contents return $ mapMaybe (fileKey . takeFileName) files , return [] )